PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc03100.1.g00120.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GRAS
Protein Properties Length: 669aa    MW: 72585.8 Da    PI: 10.5932
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc03100.1.g00120.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS210.97.2e-6511946039374
                          GRAS  39 qRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavege..ervHiiDf 117
                                    R+aayf+ ALa+rl+r      + +++s+    + +e++ a+++f+++sP+++++h+taNqaI+ea+e    +r+H+iDf
  Zmw_sc03100.1.g00120.1.am.mk 119 VRVAAYFADALASRLLR------SPVAASPR--ATRTEQFLAYTMFYQTSPLYQLAHFTANQAIVEAFEAGgrRRLHVIDF 191
                                   5****************......33333333..35789999***************************9766699****** PP

                          GRAS 118 disqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrledleleeLr 195
                                   d    +   +   + ++ +  e++ slRiTg+g     s++el++t+ rL++fA+ + +++fef+ +v   ++  + ++  
  Zmw_sc03100.1.g00120.1.am.mk 192 DSLSDAAATSTSSS-SDGDgdEPAVSLRITGFGT----SADELRQTEARLTRFASGCaNLRFEFEGIVDGLTSRGRRHDAV 267
                                   *8876655443333.3333335566*********....9***************97549*******644444455555555 PP

                          GRAS 196 vkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse........sFlerflealeyysa 266
                                   vk+  + +++Vnlv+  +r       ++s+  ++L  v+sl+P  v +ve+   ++s+         +l rf+ +l+y++a
  Zmw_sc03100.1.g00120.1.am.mk 268 VKTedDATVVVNLVFPDERDT----GTSSRECSTLARVRSLNPSFVFLVEKHDGTGSSatsrgptsLLLPRFTACLRYFAA 344
                                   555548899999999554443....34444679*****************997776555777888789************* PP

                          GRAS 267 lfdsleaklpreseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvks 346
                                   +fdsl++ lp++s er  +E+  lg ei+n++a   ++ +  +h+  + W+ ++e+aGF+ v+ls++a++qaklll++ ++
  Zmw_sc03100.1.g00120.1.am.mk 345 VFDSLHECLPADSAERLAIEKNHLGSEISNAIASLDDHhHGDDHTAGAIWKVMMEDAGFEGVKLSSRAVSQAKLLLKMKSG 425
                                   *********************************988874667899999*****************************9774 PP

                          GRAS 347 dg.....yrve.eesgslv.lgWkdrpLvsvSaWr 374
                                    g      rv   +sg ++ lgW+d +L++++aWr
  Zmw_sc03100.1.g00120.1.am.mk 426 CGagsggLRVVdGDSGKAMsLGWRDSALITATAWR 460
                                   43334455555366777777**************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098534.00344433IPR005202Transcription factor GRAS
PfamPF035142.5E-62119460IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 669 aa     Download sequence    Send to blast
MNLTLSLGVS NGGAAKKRKL WEGVVDDVED GGDRGRVIMR LLQARERMMA RLEQDDETWM  60
MWPPERPATR KRPPRRCRRS TAARXXXXGG GIRLMHRLLS SVAAGEAGDA QAAAAALQVR  120
VAAYFADALA SRLLRSPVAA SPRATRTEQF LAYTMFYQTS PLYQLAHFTA NQAIVEAFEA  180
GGRRRLHVID FDSLSDAAAT STSSSSDGDG DEPAVSLRIT GFGTSADELR QTEARLTRFA  240
SGCANLRFEF EGIVDGLTSR GRRHDAVVKT EDDATVVVNL VFPDERDTGT SSRECSTLAR  300
VRSLNPSFVF LVEKHDGTGS SATSRGPTSL LLPRFTACLR YFAAVFDSLH ECLPADSAER  360
LAIEKNHLGS EISNAIASLD DHHHGDDHTA GAIWKVMMED AGFEGVKLSS RAVSQAKLLL  420
KMKSGCGAGS GGLRVVDGDS GKAMSLGWRD SALITATAWR RRRSSESFTE PLGLLHLIQI  480
CSEDSAVETS AGKPRRRAWR TTTVSFRDDD DDEEETGSAF CCPQTRRLLY ARAVARLISR  540
AGGVAEYVRK PTRRGSRHRA SLPPRHAGEI PSPSRRRQQP PVRVFVNLAG RPPSVSASRT  600
ARSGRLRPRR VRARAWSVPR LGVVVCVAGA RARACFGGGA GGGSGRGGAR DSDPERIGSD  660
RGRARTEMV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A1e-239946026375GRAS family transcription factor containing p
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004975641.10.0PREDICTED: DELLA protein DWARF8-like
TrEMBLK3Y6Y10.0K3Y6Y1_SETIT; Uncharacterized protein
STRINGSi009972m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP116493038